rpf:rpf.git
4 years agoUpdate for evolving OpenMx API
Joshua Nathaniel Pritikin [Sat, 27 Jul 2013 15:39:07 +0000 (21:09 +0530)]
Update for evolving OpenMx API

4 years agoAutomatically exclude invalid data in Rasch fit stats
Joshua Nathaniel Pritikin [Wed, 24 Jul 2013 07:53:20 +0000 (13:23 +0530)]
Automatically exclude invalid data in Rasch fit stats

4 years agoFix outfit.z based on a suggestion from Mike Linacre
Joshua Nathaniel Pritikin [Wed, 24 Jul 2013 07:50:22 +0000 (13:20 +0530)]
Fix outfit.z based on a suggestion from Mike Linacre

These changes were adapted from Phil's mirt package. Compared to mirt, I
only used the adjusted variance for outfit because the resulting stats
match Winsteps more closely than if the adjusted variance is used for
both infit and outfit.

4 years agoutils::recover masks error status
Joshua Nathaniel Pritikin [Wed, 24 Jul 2013 04:15:16 +0000 (09:45 +0530)]
utils::recover masks error status

4 years agoMove aside broken vignette
Joshua Nathaniel Pritikin [Mon, 22 Jul 2013 14:55:09 +0000 (20:25 +0530)]
Move aside broken vignette

4 years agoAdd vignette similar to the flexMIRT plotting package
Joshua Nathaniel Pritikin [Mon, 22 Jul 2013 14:51:30 +0000 (20:21 +0530)]
Add vignette similar to the flexMIRT plotting package

4 years agoBump version
Joshua Nathaniel Pritikin [Thu, 18 Jul 2013 08:02:37 +0000 (13:32 +0530)]
Bump version

4 years agoAdd method to retrieve parameter bounds, if available
Joshua Nathaniel Pritikin [Thu, 18 Jul 2013 08:01:37 +0000 (13:31 +0530)]
Add method to retrieve parameter bounds, if available

4 years agoComply with OpenMx ordered factor policy
Joshua Nathaniel Pritikin [Mon, 15 Jul 2013 13:52:06 +0000 (19:22 +0530)]
Comply with OpenMx ordered factor policy

4 years agoAdd support for windows
Joshua Nathaniel Pritikin [Wed, 10 Jul 2013 04:44:48 +0000 (10:14 +0530)]
Add support for windows

4 years agoFurther improve flexmirt import/export
Joshua Nathaniel Pritikin [Fri, 5 Jul 2013 05:03:08 +0000 (10:33 +0530)]
Further improve flexmirt import/export

4 years agoBump version
Joshua Nathaniel Pritikin [Fri, 5 Jul 2013 05:03:31 +0000 (10:33 +0530)]
Bump version

4 years agoOmit test-dLL until OpenMx is available on CRAN
Joshua Nathaniel Pritikin [Fri, 5 Jul 2013 04:01:06 +0000 (09:31 +0530)]
Omit test-dLL until OpenMx is available on CRAN

4 years agoRestore test
Joshua Nathaniel Pritikin [Sat, 29 Jun 2013 10:29:59 +0000 (15:59 +0530)]
Restore test

4 years agoRename, it's Item Factor Analysis
Joshua Nathaniel Pritikin [Sat, 29 Jun 2013 09:13:54 +0000 (14:43 +0530)]
Rename, it's Item Factor Analysis

4 years agoBump version
Joshua Nathaniel Pritikin [Sat, 29 Jun 2013 09:05:52 +0000 (14:35 +0530)]
Bump version

4 years agoStop using paste0 for expanded compatibility
Joshua Nathaniel Pritikin [Fri, 28 Jun 2013 11:23:46 +0000 (16:53 +0530)]
Stop using paste0 for expanded compatibility

4 years agoFlip default for multidimensional to TRUE
Joshua Nathaniel Pritikin [Fri, 28 Jun 2013 11:08:02 +0000 (16:38 +0530)]
Flip default for multidimensional to TRUE

4 years agoMark test as broken and exclude from release
Joshua Nathaniel Pritikin [Fri, 28 Jun 2013 10:54:57 +0000 (16:24 +0530)]
Mark test as broken and exclude from release

4 years agoPrep for cran
Joshua Nathaniel Pritikin [Fri, 28 Jun 2013 10:33:37 +0000 (16:03 +0530)]
Prep for cran

4 years agoDeadcode
Joshua Nathaniel Pritikin [Fri, 28 Jun 2013 09:14:29 +0000 (14:44 +0530)]
Deadcode

4 years agoRemove redundent gpcm item model
Joshua Nathaniel Pritikin [Fri, 28 Jun 2013 09:12:58 +0000 (14:42 +0530)]
Remove redundent gpcm item model

4 years agoRemove prefit/postfit stuff
Joshua Nathaniel Pritikin [Fri, 28 Jun 2013 09:00:16 +0000 (14:30 +0530)]
Remove prefit/postfit stuff

4 years agoRemove restrict keyword to facilitate C++ compatibility
Joshua Nathaniel Pritikin [Fri, 28 Jun 2013 08:52:13 +0000 (14:22 +0530)]
Remove restrict keyword to facilitate C++ compatibility

4 years agoTemporarily exclude vignette from build
Joshua Nathaniel Pritikin [Fri, 28 Jun 2013 08:50:36 +0000 (14:20 +0530)]
Temporarily exclude vignette from build

4 years agoChange behavior for missing data
Joshua Nathaniel Pritikin [Fri, 28 Jun 2013 05:36:18 +0000 (11:06 +0530)]
Change behavior for missing data

4 years agoFix rpf.1dim.fit brokenness from the t() removal
Joshua Nathaniel Pritikin [Fri, 7 Jun 2013 11:09:21 +0000 (16:39 +0530)]
Fix rpf.1dim.fit brokenness from the t() removal

4 years agoflexmirt import
Joshua Nathaniel Pritikin [Fri, 7 Jun 2013 05:15:49 +0000 (10:45 +0530)]
flexmirt import

4 years agoRemove prior related slots
Joshua Nathaniel Pritikin [Thu, 6 Jun 2013 11:29:17 +0000 (16:59 +0530)]
Remove prior related slots

4 years agoUpdate for OpenMx API
Joshua Nathaniel Pritikin [Thu, 6 Jun 2013 11:27:53 +0000 (16:57 +0530)]
Update for OpenMx API

4 years agoAdd dTheta for drm, grm, and nrm
Joshua Nathaniel Pritikin [Thu, 6 Jun 2013 11:19:01 +0000 (16:49 +0530)]
Add dTheta for drm, grm, and nrm

4 years agoRename deriv test
Joshua Nathaniel Pritikin [Thu, 6 Jun 2013 06:25:06 +0000 (11:55 +0530)]
Rename deriv test

4 years agoDocument useful scripts in ./util/
Joshua Nathaniel Pritikin [Thu, 6 Jun 2013 06:22:47 +0000 (11:52 +0530)]
Document useful scripts in ./util/

4 years agoRemove mental silence data for now
Joshua Nathaniel Pritikin [Thu, 6 Jun 2013 06:20:36 +0000 (11:50 +0530)]
Remove mental silence data for now

4 years agoSlight reorg to hoist data out of test
Joshua Nathaniel Pritikin [Thu, 6 Jun 2013 06:19:14 +0000 (11:49 +0530)]
Slight reorg to hoist data out of test

4 years agoUse "Liking for science" from Winsteps mostly unmodified
Joshua Nathaniel Pritikin [Thu, 6 Jun 2013 06:16:58 +0000 (11:46 +0530)]
Use "Liking for science" from Winsteps mostly unmodified

4 years agoFix tests
Joshua Nathaniel Pritikin [Sun, 2 Jun 2013 16:04:35 +0000 (21:34 +0530)]
Fix tests

4 years agoAdd mean & cov parameters to rpf.sample
Joshua Nathaniel Pritikin [Sun, 2 Jun 2013 04:49:48 +0000 (10:19 +0530)]
Add mean & cov parameters to rpf.sample

4 years agoFind the T.c to equate mirt gpcm and our nominal model
Joshua Nathaniel Pritikin [Sat, 1 Jun 2013 12:14:25 +0000 (17:44 +0530)]
Find the T.c to equate mirt gpcm and our nominal model

4 years agoRename for consistency
Joshua Nathaniel Pritikin [Sat, 1 Jun 2013 11:08:45 +0000 (16:38 +0530)]
Rename for consistency

4 years agoRemove G-H quadrature stuff
Joshua Nathaniel Pritikin [Thu, 30 May 2013 09:11:42 +0000 (14:41 +0530)]
Remove G-H quadrature stuff

4 years agoWill implement priors using MxAlgebra
Joshua Nathaniel Pritikin [Wed, 29 May 2013 04:53:46 +0000 (10:23 +0530)]
Will implement priors using MxAlgebra

4 years agoRemove old 3PL deriv code
Joshua Nathaniel Pritikin [Wed, 29 May 2013 04:52:16 +0000 (10:22 +0530)]
Remove old 3PL deriv code

4 years agoName columns appropriately
Joshua Nathaniel Pritikin [Wed, 29 May 2013 04:08:18 +0000 (09:38 +0530)]
Name columns appropriately

4 years agoImplement rescale and add test
Joshua Nathaniel Pritikin [Tue, 28 May 2013 16:29:14 +0000 (21:59 +0530)]
Implement rescale and add test

4 years agoRemove t() around rpf.prob, rpf.logprob
Joshua Nathaniel Pritikin [Mon, 27 May 2013 09:52:01 +0000 (15:22 +0530)]
Remove t() around rpf.prob, rpf.logprob

4 years agoRename slots numOutcomes->outcomes, dimensions->factors
Joshua Nathaniel Pritikin [Mon, 27 May 2013 09:11:37 +0000 (14:41 +0530)]
Rename slots numOutcomes->outcomes, dimensions->factors

4 years agoIgnore tmp file
Joshua Nathaniel Pritikin [Mon, 27 May 2013 05:31:53 +0000 (11:01 +0530)]
Ignore tmp file

4 years agoSplit orlando_thissen_2000 from the cell collapsing algorithm
Joshua Nathaniel Pritikin [Sat, 25 May 2013 15:20:00 +0000 (20:50 +0530)]
Split orlando_thissen_2000 from the cell collapsing algorithm

4 years agoPut both science data frames in the same rda
Joshua Nathaniel Pritikin [Sat, 25 May 2013 14:27:18 +0000 (19:57 +0530)]
Put both science data frames in the same rda

4 years agoRemove numParam slot
Joshua Nathaniel Pritikin [Mon, 20 May 2013 10:14:45 +0000 (15:44 +0530)]
Remove numParam slot

4 years agoCopy derivatives from Phil Chalmer's mirt package
Joshua Nathaniel Pritikin [Fri, 17 May 2013 12:00:53 +0000 (17:30 +0530)]
Copy derivatives from Phil Chalmer's mirt package

4 years agoSet up VignetteBuilder for knitr
Joshua Nathaniel Pritikin [Fri, 24 May 2013 08:41:40 +0000 (14:11 +0530)]
Set up VignetteBuilder for knitr

4 years agoAcknowledge that dimension and factor mean the same thing
Joshua Nathaniel Pritikin [Mon, 20 May 2013 10:13:57 +0000 (15:43 +0530)]
Acknowledge that dimension and factor mean the same thing

4 years agoSkip vignette for quicker quick install
Joshua Nathaniel Pritikin [Sun, 19 May 2013 09:15:43 +0000 (14:45 +0530)]
Skip vignette for quicker quick install

4 years agoAdd -Wall if gcc is detected
Joshua Nathaniel Pritikin [Sun, 19 May 2013 07:29:23 +0000 (12:59 +0530)]
Add -Wall if gcc is detected

4 years agoSet up gdb's source directory
Joshua Nathaniel Pritikin [Sat, 18 May 2013 13:02:23 +0000 (18:32 +0530)]
Set up gdb's source directory

4 years agoIndicate NaN with NaN instead of 0
Joshua Nathaniel Pritikin [Sat, 18 May 2013 09:16:08 +0000 (14:46 +0530)]
Indicate NaN with NaN instead of 0

4 years agoAdd area parameter to deriv to reduce memory requirements
Joshua Nathaniel Pritikin [Sat, 18 May 2013 06:44:52 +0000 (12:14 +0530)]
Add area parameter to deriv to reduce memory requirements

4 years agoOmit paramMask from deriv API
Joshua Nathaniel Pritikin [Sat, 18 May 2013 05:35:27 +0000 (11:05 +0530)]
Omit paramMask from deriv API

4 years agoRename gradient to deriv
Joshua Nathaniel Pritikin [Fri, 17 May 2013 13:31:09 +0000 (19:01 +0530)]
Rename gradient to deriv

4 years agoCross check item models with mirt package
Joshua Nathaniel Pritikin [Fri, 17 May 2013 12:00:17 +0000 (17:30 +0530)]
Cross check item models with mirt package

4 years agoAdapt flexmirt code for graded response model
Joshua Nathaniel Pritikin [Fri, 17 May 2013 11:58:18 +0000 (17:28 +0530)]
Adapt flexmirt code for graded response model

4 years agoAdd some sanity checks
Joshua Nathaniel Pritikin [Thu, 16 May 2013 09:28:24 +0000 (14:58 +0530)]
Add some sanity checks

4 years agoAdd more tests for infit/outfit; disable outfit.z pending math
Joshua Nathaniel Pritikin [Mon, 13 May 2013 09:58:14 +0000 (15:28 +0530)]
Add more tests for infit/outfit; disable outfit.z pending math

4 years agoNote that infit/outfit assume Rasch item models
Joshua Nathaniel Pritikin [Mon, 25 Mar 2013 18:38:41 +0000 (14:38 -0400)]
Note that infit/outfit assume Rasch item models

4 years agoBump version
Joshua Nathaniel Pritikin [Wed, 13 Mar 2013 18:11:04 +0000 (14:11 -0400)]
Bump version

4 years agoUpdate doc
Joshua Nathaniel Pritikin [Wed, 13 Mar 2013 17:55:38 +0000 (13:55 -0400)]
Update doc

4 years agoSupport for rescaling the latent distribution
Joshua Nathaniel Pritikin [Wed, 13 Mar 2013 18:01:52 +0000 (14:01 -0400)]
Support for rescaling the latent distribution

4 years agorpf.mean.info
Joshua Nathaniel Pritikin [Wed, 13 Mar 2013 17:24:27 +0000 (13:24 -0400)]
rpf.mean.info

4 years agoRemove some priors from the R object representation
Joshua Nathaniel Pritikin [Sun, 10 Mar 2013 21:23:43 +0000 (17:23 -0400)]
Remove some priors from the R object representation

4 years agoAdd rule for tangle
Joshua Nathaniel Pritikin [Sun, 10 Mar 2013 21:19:30 +0000 (17:19 -0400)]
Add rule for tangle

4 years agoExtend range of rpf.prob and rpf.gradient
Joshua Nathaniel Pritikin [Sun, 10 Mar 2013 21:17:23 +0000 (17:17 -0400)]
Extend range of rpf.prob and rpf.gradient

4 years agoIntroductory doc
Joshua Nathaniel Pritikin [Sun, 10 Mar 2013 21:05:58 +0000 (17:05 -0400)]
Introductory doc

4 years agoAdd stub for factor loadings
Joshua Nathaniel Pritikin [Tue, 12 Feb 2013 19:28:32 +0000 (14:28 -0500)]
Add stub for factor loadings

4 years agoOrlando & Thissen (2000) S-Chi-sq fit statistics
Joshua Nathaniel Pritikin [Sun, 10 Feb 2013 20:37:48 +0000 (15:37 -0500)]
Orlando & Thissen (2000) S-Chi-sq fit statistics

4 years agoAdd type aliases for rpf.gradient
Joshua Nathaniel Pritikin [Fri, 1 Feb 2013 02:08:41 +0000 (21:08 -0500)]
Add type aliases for rpf.gradient

4 years agoReindent
Joshua Nathaniel Pritikin [Thu, 31 Jan 2013 14:23:14 +0000 (09:23 -0500)]
Reindent

4 years agoPermit 0 slopes in mdim_drm_prior if param fixed
Joshua Nathaniel Pritikin [Wed, 30 Jan 2013 16:49:06 +0000 (11:49 -0500)]
Permit 0 slopes in mdim_drm_prior if param fixed

4 years agoAllow item parameters as a matrix in addition to a list
Joshua Nathaniel Pritikin [Wed, 30 Jan 2013 15:27:45 +0000 (10:27 -0500)]
Allow item parameters as a matrix in addition to a list

4 years agoAvoid packaging .Rhistory
Joshua Nathaniel Pritikin [Fri, 25 Jan 2013 17:39:22 +0000 (12:39 -0500)]
Avoid packaging .Rhistory

4 years agoDocument orientation of probability output
Joshua Nathaniel Pritikin [Fri, 25 Jan 2013 14:59:38 +0000 (09:59 -0500)]
Document orientation of probability output

4 years agoBump version
Joshua Nathaniel Pritikin [Fri, 25 Jan 2013 14:27:11 +0000 (09:27 -0500)]
Bump version

4 years agoDepend on R >= 2.15
Joshua Nathaniel Pritikin [Fri, 25 Jan 2013 14:22:00 +0000 (09:22 -0500)]
Depend on R >= 2.15

4 years agoShow how to obtain the item-wise covariance of residuals
Joshua Nathaniel Pritikin [Mon, 21 Jan 2013 17:06:17 +0000 (12:06 -0500)]
Show how to obtain the item-wise covariance of residuals

4 years agoAvoid installation of build scripts
Joshua Nathaniel Pritikin [Mon, 21 Jan 2013 13:42:49 +0000 (08:42 -0500)]
Avoid installation of build scripts

4 years agoInstall include file
Joshua Nathaniel Pritikin [Mon, 21 Jan 2013 13:34:15 +0000 (08:34 -0500)]
Install include file

4 years agoImprove doc of infit/outfit
Joshua Nathaniel Pritikin [Sun, 20 Jan 2013 23:02:19 +0000 (18:02 -0500)]
Improve doc of infit/outfit

4 years agoBump version
Joshua Nathaniel Pritikin [Sun, 20 Jan 2013 21:21:25 +0000 (16:21 -0500)]
Bump version

4 years agoAdd another citation for the ogive constant
Joshua Nathaniel Pritikin [Sun, 20 Jan 2013 21:03:33 +0000 (16:03 -0500)]
Add another citation for the ogive constant

4 years agoUpdate doc
Joshua Nathaniel Pritikin [Sun, 20 Jan 2013 03:00:53 +0000 (22:00 -0500)]
Update doc

4 years agoCreate design matrix suitable for a mixture of dimensions
Joshua Nathaniel Pritikin [Sun, 20 Jan 2013 02:48:11 +0000 (21:48 -0500)]
Create design matrix suitable for a mixture of dimensions

4 years agoAdd rpf.prior and rpf.gradient R wrappers
Joshua Nathaniel Pritikin [Sun, 20 Jan 2013 02:05:16 +0000 (21:05 -0500)]
Add rpf.prior and rpf.gradient R wrappers

4 years agoRemove startingParam, getLocation, and setLocation
Joshua Nathaniel Pritikin [Sat, 19 Jan 2013 02:44:03 +0000 (21:44 -0500)]
Remove startingParam, getLocation, and setLocation

4 years agoRedesign C API
Joshua Nathaniel Pritikin [Sat, 19 Jan 2013 02:40:46 +0000 (21:40 -0500)]
Redesign C API

4 years agoGradients working for drm (both) and gpcm (1dim)
Joshua Nathaniel Pritikin [Wed, 16 Jan 2013 19:27:14 +0000 (14:27 -0500)]
Gradients working for drm (both) and gpcm (1dim)

4 years agoItem fit statistics and doc update
Joshua Nathaniel Pritikin [Thu, 10 Jan 2013 01:58:08 +0000 (20:58 -0500)]
Item fit statistics and doc update

4 years agoFamous "liking for science" sample dataset
Joshua Nathaniel Pritikin [Wed, 9 Jan 2013 21:20:02 +0000 (16:20 -0500)]
Famous "liking for science" sample dataset

4 years agoImprove item info example and add data vs model plot example
Joshua Nathaniel Pritikin [Sat, 5 Jan 2013 22:37:27 +0000 (17:37 -0500)]
Improve item info example and add data vs model plot example

4 years agoAdd sample dataset
Joshua Nathaniel Pritikin [Sat, 5 Jan 2013 20:50:50 +0000 (15:50 -0500)]
Add sample dataset