openmx:openmx.git
3 years agosnapshot2 yang
Joshua Nathaniel Pritikin [Tue, 25 Mar 2014 15:08:51 +0000 (11:08 -0400)]
snapshot2

3 years agoset compiler for debugging
Yang Wang [Thu, 3 Apr 2014 11:40:04 +0000 (11:40 +0000)]
set compiler for debugging

3 years agoDevelopment
Joshua Nathaniel Pritikin [Mon, 22 Jul 2013 08:00:32 +0000 (13:30 +0530)]
Development

3 years agoAdding back manually built help files
tbates [Tue, 15 Apr 2014 15:47:22 +0000 (15:47 +0000)]
Adding back manually built help files

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3353 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAdding back manually built help files
tbates [Tue, 15 Apr 2014 14:36:13 +0000 (14:36 +0000)]
Adding back manually built help files

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3352 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoDeleting last .Rd file and added <svn propset svn:ignore "*.Rd" .> to ignore Rd...
tbates [Tue, 15 Apr 2014 00:57:54 +0000 (00:57 +0000)]
Deleting last .Rd file and added <svn propset svn:ignore "*.Rd" .>  to ignore Rd files in future

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3351 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRemoving .Rd files (people think these shouldn't be repo'd as they can be built)
tbates [Tue, 15 Apr 2014 00:53:30 +0000 (00:53 +0000)]
Removing .Rd files (people think these shouldn't be repo'd as they can be built)

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3350 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agouse mxComputeSequence to compute output$hessian
tbates [Mon, 14 Apr 2014 19:09:36 +0000 (19:09 +0000)]
use mxComputeSequence to compute output$hessian

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3349 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoseveral Rd files now built with roxygen
tbates [Mon, 14 Apr 2014 18:41:07 +0000 (18:41 +0000)]
several Rd files now built with roxygen

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3348 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoupdating comments and examples to use $ rather than @ (and @@ where used in #' commen...
tbates [Mon, 14 Apr 2014 18:40:27 +0000 (18:40 +0000)]
updating comments and examples to use $ rather than @ (and @@ where used in #' comments. Documents ?OpenMx in zzz.R

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3347 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoHandle omxRemoveRowsAndColumns for row-major order; add tests
jpritikin [Sun, 13 Apr 2014 23:24:30 +0000 (23:24 +0000)]
Handle omxRemoveRowsAndColumns for row-major order; add tests

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3346 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoomxAliasMatrix, omxResetAliasedMatrix are essentially omxCopyMatrix
jpritikin [Sun, 13 Apr 2014 22:15:18 +0000 (22:15 +0000)]
omxAliasMatrix, omxResetAliasedMatrix are essentially omxCopyMatrix

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3345 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoProhibit omxResetAliasedMatrix on non-aliased matrices
jpritikin [Sun, 13 Apr 2014 22:15:16 +0000 (22:15 +0000)]
Prohibit omxResetAliasedMatrix on non-aliased matrices

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3344 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agochanges to doc files
hmaes [Sun, 13 Apr 2014 21:24:55 +0000 (21:24 +0000)]
changes to doc files

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3343 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoBug fixes to conformability checks in SSM, and SSM expectation arguments allowed...
mhunter [Sun, 13 Apr 2014 19:40:00 +0000 (19:40 +0000)]
Bug fixes to conformability checks in SSM, and SSM expectation arguments allowed to be the result of algebras.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3342 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoSimplify implementation of aliased matrices
jpritikin [Sun, 13 Apr 2014 19:17:36 +0000 (19:17 +0000)]
Simplify implementation of aliased matrices

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3341 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRevert "Temporarily remove conformability checking in SSM and add some debugging...
jpritikin [Sun, 13 Apr 2014 19:17:32 +0000 (19:17 +0000)]
Revert "Temporarily remove conformability checking in SSM and add some debugging in SSM."

This reverts commit 928803c2fb96d9e31f32ad4c68a516c43a4250eb.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3340 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRevert "Development"
jpritikin [Sun, 13 Apr 2014 00:29:43 +0000 (00:29 +0000)]
Revert "Development"

This reverts commit 8526380cd999593b11634f2a0e8c54d9b636aa0f.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3339 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoFix memory corruption in omxResetAliasedMatrix
jpritikin [Sun, 13 Apr 2014 00:28:16 +0000 (00:28 +0000)]
Fix memory corruption in omxResetAliasedMatrix

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3338 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoDevelopment
jpritikin [Sun, 13 Apr 2014 00:28:15 +0000 (00:28 +0000)]
Development

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3337 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoTidy mxComputeEM user interface, add doc
jpritikin [Sat, 12 Apr 2014 18:55:45 +0000 (18:55 +0000)]
Tidy mxComputeEM user interface, add doc

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3336 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRemove the last @
jpritikin [Sat, 12 Apr 2014 18:55:42 +0000 (18:55 +0000)]
Remove the last @

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3335 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoPlace BA81 expectation in observed mode by default
jpritikin [Sat, 12 Apr 2014 18:55:39 +0000 (18:55 +0000)]
Place BA81 expectation in observed mode by default

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3334 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoTemporarily remove conformability checking in SSM and add some debugging in SSM.
mhunter [Sat, 12 Apr 2014 14:22:10 +0000 (14:22 +0000)]
Temporarily remove conformability checking in SSM and add some debugging in SSM.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3333 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoProhibit mxFitFunctionMultigroup with no groups
jpritikin [Sat, 12 Apr 2014 12:15:33 +0000 (12:15 +0000)]
Prohibit mxFitFunctionMultigroup with no groups

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3332 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRemove old Mx
jpritikin [Sat, 12 Apr 2014 11:11:12 +0000 (11:11 +0000)]
Remove old Mx

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3331 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRemove unused slots
jpritikin [Sat, 12 Apr 2014 10:05:11 +0000 (10:05 +0000)]
Remove unused slots

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3330 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoConvert paste0 into paste for R 2.14
jpritikin [Fri, 11 Apr 2014 22:34:00 +0000 (22:34 +0000)]
Convert paste0 into paste for R 2.14

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3329 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRename observed.fit to observedFit and require a name instead of MxCompute
jpritikin [Fri, 11 Apr 2014 22:23:43 +0000 (22:23 +0000)]
Rename observed.fit to observedFit and require a name instead of MxCompute

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3328 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRename free.set to freeSet
jpritikin [Fri, 11 Apr 2014 22:23:39 +0000 (22:23 +0000)]
Rename free.set to freeSet

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3327 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoComputeEM: remove post.mstep argument
jpritikin [Fri, 11 Apr 2014 22:23:31 +0000 (22:23 +0000)]
ComputeEM: remove post.mstep argument

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3326 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoTrying once again. Lots of updates to the help files.
sboker [Fri, 11 Apr 2014 18:51:29 +0000 (18:51 +0000)]
Trying once again.  Lots of updates to the help files.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3325 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoTune N-R performance a bit
jpritikin [Fri, 11 Apr 2014 18:15:52 +0000 (18:15 +0000)]
Tune N-R performance a bit

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3324 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoCheckpoint rewrite
jpritikin [Fri, 11 Apr 2014 18:15:51 +0000 (18:15 +0000)]
Checkpoint rewrite

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3323 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoUpdate failing test to check for correct answers
jpritikin [Fri, 11 Apr 2014 18:15:49 +0000 (18:15 +0000)]
Update failing test to check for correct answers

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3322 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoProblem with mxConstraint.Rd solved
mzahery [Fri, 11 Apr 2014 16:28:48 +0000 (16:28 +0000)]
Problem with mxConstraint.Rd solved

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3321 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agochanges to doc files
hmaes [Fri, 11 Apr 2014 16:16:03 +0000 (16:16 +0000)]
changes to doc files

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3320 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agochanges to doc files
hmaes [Fri, 11 Apr 2014 16:15:40 +0000 (16:15 +0000)]
changes to doc files

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3319 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agochanges to doc files
hmaes [Fri, 11 Apr 2014 16:15:26 +0000 (16:15 +0000)]
changes to doc files

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3318 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoManual page updates to change @ to $
sboker [Fri, 11 Apr 2014 15:04:58 +0000 (15:04 +0000)]
Manual page updates to change @ to $

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3317 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoChanged more @s to .
tbrick [Fri, 11 Apr 2014 15:02:32 +0000 (15:02 +0000)]
Changed more @s to .

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3316 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAdd failing test for CSOLNP
jpritikin [Fri, 11 Apr 2014 13:45:31 +0000 (13:45 +0000)]
Add failing test for CSOLNP

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3315 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoExpectation-Fit revision to multigroup User's Guide pages.
mhunter [Fri, 11 Apr 2014 06:09:41 +0000 (06:09 +0000)]
Expectation-Fit revision to multigroup User's Guide pages.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3314 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoTemporarily remove failing test from our torture list
jpritikin [Thu, 10 Apr 2014 09:57:48 +0000 (09:57 +0000)]
Temporarily remove failing test from our torture list

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3313 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRelax tolerance for CSOLNP
jpritikin [Thu, 10 Apr 2014 09:56:35 +0000 (09:56 +0000)]
Relax tolerance for CSOLNP

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3312 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAllow standard errors without Richardson extrapolation
jpritikin [Wed, 9 Apr 2014 15:16:09 +0000 (15:16 +0000)]
Allow standard errors without Richardson extrapolation

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3311 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoIncrease default CSOLNP tolerance to 1e-9 to match default NPSOL tolerance
jpritikin [Wed, 9 Apr 2014 15:16:05 +0000 (15:16 +0000)]
Increase default CSOLNP tolerance to 1e-9 to match default NPSOL tolerance

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3310 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoR-2.14 does not have norm(...,"2")
jpritikin [Wed, 9 Apr 2014 13:44:05 +0000 (13:44 +0000)]
R-2.14 does not have norm(...,"2")

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3309 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRestore bootstrap tests
jpritikin [Wed, 9 Apr 2014 01:42:06 +0000 (01:42 +0000)]
Restore bootstrap tests

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3308 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoCSOLNP: gradient is returned
mzahery [Tue, 8 Apr 2014 22:28:47 +0000 (22:28 +0000)]
CSOLNP: gradient is returned

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3307 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAdd failing optimizer test
jpritikin [Tue, 8 Apr 2014 19:59:48 +0000 (19:59 +0000)]
Add failing optimizer test

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3306 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoUse --debugger-args, maybe helps on MacOS
jpritikin [Tue, 8 Apr 2014 14:42:13 +0000 (14:42 +0000)]
Use --debugger-args, maybe helps on MacOS

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3305 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoSuppress gdb's new thread/thread exited messages
jpritikin [Tue, 8 Apr 2014 10:05:07 +0000 (10:05 +0000)]
Suppress gdb's new thread/thread exited messages

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3304 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRepair test: don't ask for unavailable derivs
jpritikin [Tue, 8 Apr 2014 09:55:08 +0000 (09:55 +0000)]
Repair test: don't ask for unavailable derivs

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3303 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRelax tolerance for CSOLNP
jpritikin [Tue, 8 Apr 2014 09:55:06 +0000 (09:55 +0000)]
Relax tolerance for CSOLNP

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3302 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoPreserve dimnames in assignments to MxMatrix slots
jpritikin [Mon, 7 Apr 2014 19:07:44 +0000 (19:07 +0000)]
Preserve dimnames in assignments to MxMatrix slots

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3301 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoProhibit @ in test scripts
jpritikin [Mon, 7 Apr 2014 19:07:43 +0000 (19:07 +0000)]
Prohibit @ in test scripts

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3300 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAdd test for a continuous time model (contributed by Charles Driver)
jpritikin [Mon, 7 Apr 2014 19:07:42 +0000 (19:07 +0000)]
Add test for a continuous time model (contributed by Charles Driver)

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3299 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAdded failing test for checkpointing output.
rkirkpatrick [Mon, 7 Apr 2014 15:28:17 +0000 (15:28 +0000)]
Added failing test for checkpointing output.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3298 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRefuse to compute derivs for no free parameters
jpritikin [Mon, 7 Apr 2014 14:49:31 +0000 (14:49 +0000)]
Refuse to compute derivs for no free parameters

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3297 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoFix bug introduced in "rework reporting of iterations and optimizer status"
jpritikin [Mon, 7 Apr 2014 14:49:30 +0000 (14:49 +0000)]
Fix bug introduced in "rework reporting of iterations and optimizer status"

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3296 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoFix hanging test
jpritikin [Mon, 7 Apr 2014 10:06:31 +0000 (10:06 +0000)]
Fix hanging test

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3295 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoNewton-Raphson rewrite
jpritikin [Sun, 6 Apr 2014 16:53:29 +0000 (16:53 +0000)]
Newton-Raphson rewrite

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3294 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRework reporting of iterations and optimizer status; add failing test
jpritikin [Sun, 6 Apr 2014 16:53:23 +0000 (16:53 +0000)]
Rework reporting of iterations and optimizer status; add failing test

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3293 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoFix memory corruption in matrix populate lists
jpritikin [Sat, 5 Apr 2014 23:28:48 +0000 (23:28 +0000)]
Fix memory corruption in matrix populate lists

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3292 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoUpdate nightly IFA tests for mxDataDynamic
jpritikin [Sat, 5 Apr 2014 10:38:27 +0000 (10:38 +0000)]
Update nightly IFA tests for mxDataDynamic

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3291 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoWill fail until gradient is returned by CSOLNP
jpritikin [Sat, 5 Apr 2014 10:03:09 +0000 (10:03 +0000)]
Will fail until gradient is returned by CSOLNP

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3290 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRelax tolerance for CSOLNP
jpritikin [Sat, 5 Apr 2014 09:52:42 +0000 (09:52 +0000)]
Relax tolerance for CSOLNP

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3289 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoOrdinal and GMM docs done
restabrook [Fri, 4 Apr 2014 19:23:12 +0000 (19:23 +0000)]
Ordinal and GMM docs done

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3288 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRemove unused omxInitMatrix argument
jpritikin [Fri, 4 Apr 2014 16:27:20 +0000 (16:27 +0000)]
Remove unused omxInitMatrix argument

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3287 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agomxDataDynamic
jpritikin [Fri, 4 Apr 2014 15:39:33 +0000 (15:39 +0000)]
mxDataDynamic

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3286 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoChange ASEM parameters based on more recent simulations
jpritikin [Fri, 4 Apr 2014 15:39:28 +0000 (15:39 +0000)]
Change ASEM parameters based on more recent simulations

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3285 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAccept 1 item spec if they are all the same
jpritikin [Fri, 4 Apr 2014 15:39:25 +0000 (15:39 +0000)]
Accept 1 item spec if they are all the same

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3284 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoTidy imxExtractSlot
jpritikin [Fri, 4 Apr 2014 15:39:22 +0000 (15:39 +0000)]
Tidy imxExtractSlot

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3283 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAdd more gdb hints
jpritikin [Fri, 4 Apr 2014 13:29:15 +0000 (13:29 +0000)]
Add more gdb hints

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3282 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoTest with gdb only if gdb is installed
jpritikin [Fri, 4 Apr 2014 13:29:14 +0000 (13:29 +0000)]
Test with gdb only if gdb is installed

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3281 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoDon't hide errors
jpritikin [Fri, 4 Apr 2014 13:29:12 +0000 (13:29 +0000)]
Don't hide errors

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3280 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRepair nightly trauma from the @->$ replacement
jpritikin [Fri, 4 Apr 2014 12:28:09 +0000 (12:28 +0000)]
Repair nightly trauma from the @->$ replacement

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3279 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoDemote some errors to debug output
jpritikin [Fri, 4 Apr 2014 10:30:26 +0000 (10:30 +0000)]
Demote some errors to debug output

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3278 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoSpeaking of aesthetics
jpritikin [Fri, 4 Apr 2014 10:30:21 +0000 (10:30 +0000)]
Speaking of aesthetics

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3277 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRepair merge conflict
jpritikin [Fri, 4 Apr 2014 10:30:19 +0000 (10:30 +0000)]
Repair merge conflict

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3276 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoFix breakage in IFA tests from @->$ replacement
jpritikin [Thu, 3 Apr 2014 21:49:49 +0000 (21:49 +0000)]
Fix breakage in IFA tests from @->$ replacement

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3275 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRevert "Move to failing until CSOLNP valgrind errors are addressed"
jpritikin [Thu, 3 Apr 2014 19:53:48 +0000 (19:53 +0000)]
Revert "Move to failing until CSOLNP valgrind errors are addressed"

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3274 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoImprove aesthetics of "Adjust state space expectation for removal of omxRaiseErrorf"
jpritikin [Thu, 3 Apr 2014 19:53:47 +0000 (19:53 +0000)]
Improve aesthetics of "Adjust state space expectation for removal of omxRaiseErrorf"

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3273 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAdd state space test of inputs.
mhunter [Thu, 3 Apr 2014 19:30:33 +0000 (19:30 +0000)]
Add state space test of inputs.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3272 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAdjust state space expectation for removal of omxRaiseErrorf.
mhunter [Thu, 3 Apr 2014 19:29:50 +0000 (19:29 +0000)]
Adjust state space expectation for removal of omxRaiseErrorf.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3271 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRestore now passing test
jpritikin [Thu, 3 Apr 2014 19:29:17 +0000 (19:29 +0000)]
Restore now passing test

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3270 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoFix misuse of stdargs macros
jpritikin [Thu, 3 Apr 2014 19:29:09 +0000 (19:29 +0000)]
Fix misuse of stdargs macros

For background, https://sourceware.org/bugzilla/show_bug.cgi?id=4977

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3269 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoEnable gdb for the regular 'make test' variants
jpritikin [Thu, 3 Apr 2014 19:04:03 +0000 (19:04 +0000)]
Enable gdb for the regular 'make test' variants

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3268 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoReplaced @ with $ in demos and tests.
tbrick [Thu, 3 Apr 2014 18:58:35 +0000 (18:58 +0000)]
Replaced @ with $ in demos and tests.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3267 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoChanges to avoid some slot conflicts using $ indexing.
tbrick [Thu, 3 Apr 2014 18:56:14 +0000 (18:56 +0000)]
Changes to avoid some slot conflicts using $ indexing.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3266 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoCSOLNP: memory leaks solved
mzahery [Thu, 3 Apr 2014 16:02:06 +0000 (16:02 +0000)]
CSOLNP: memory leaks solved

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3265 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoHook up recordIterationError for FIML
jpritikin [Thu, 3 Apr 2014 14:55:03 +0000 (14:55 +0000)]
Hook up recordIterationError for FIML

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3264 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRemove lock from FitContext::resetIterationError
jpritikin [Thu, 3 Apr 2014 14:55:03 +0000 (14:55 +0000)]
Remove lock from FitContext::resetIterationError

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3263 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRevert "Restore now passing test"
jpritikin [Thu, 3 Apr 2014 14:24:13 +0000 (14:24 +0000)]
Revert "Restore now passing test"

This reverts commit 44c86416d73cfd3ae92c1f47a587ddda0afae0f9.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3262 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAdd FitContext::recordIterationError
jpritikin [Thu, 3 Apr 2014 14:13:11 +0000 (14:13 +0000)]
Add FitContext::recordIterationError

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3261 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRestore now passing test
jpritikin [Thu, 3 Apr 2014 08:50:16 +0000 (08:50 +0000)]
Restore now passing test

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3260 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoCSOLNP: memory leaks in omxCSOLNPConfidenceIntervals function solved
mzahery [Thu, 3 Apr 2014 03:56:45 +0000 (03:56 +0000)]
CSOLNP: memory leaks in omxCSOLNPConfidenceIntervals function solved

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3259 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoCSOLNP: prints changed to mxLog
mzahery [Thu, 3 Apr 2014 03:53:38 +0000 (03:53 +0000)]
CSOLNP: prints changed to mxLog

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3258 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoDemote some errors to debug output
jpritikin [Thu, 3 Apr 2014 01:00:24 +0000 (01:00 +0000)]
Demote some errors to debug output

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3257 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1