openmx:openmx.git
3 years agoExpectation-Fit revision to multigroup User's Guide pages.
mhunter [Fri, 11 Apr 2014 06:09:41 +0000 (06:09 +0000)]
Expectation-Fit revision to multigroup User's Guide pages.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3314 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoTemporarily remove failing test from our torture list
jpritikin [Thu, 10 Apr 2014 09:57:48 +0000 (09:57 +0000)]
Temporarily remove failing test from our torture list

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3313 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRelax tolerance for CSOLNP
jpritikin [Thu, 10 Apr 2014 09:56:35 +0000 (09:56 +0000)]
Relax tolerance for CSOLNP

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3312 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAllow standard errors without Richardson extrapolation
jpritikin [Wed, 9 Apr 2014 15:16:09 +0000 (15:16 +0000)]
Allow standard errors without Richardson extrapolation

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3311 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoIncrease default CSOLNP tolerance to 1e-9 to match default NPSOL tolerance
jpritikin [Wed, 9 Apr 2014 15:16:05 +0000 (15:16 +0000)]
Increase default CSOLNP tolerance to 1e-9 to match default NPSOL tolerance

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3310 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoR-2.14 does not have norm(...,"2")
jpritikin [Wed, 9 Apr 2014 13:44:05 +0000 (13:44 +0000)]
R-2.14 does not have norm(...,"2")

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3309 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRestore bootstrap tests
jpritikin [Wed, 9 Apr 2014 01:42:06 +0000 (01:42 +0000)]
Restore bootstrap tests

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3308 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoCSOLNP: gradient is returned
mzahery [Tue, 8 Apr 2014 22:28:47 +0000 (22:28 +0000)]
CSOLNP: gradient is returned

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3307 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAdd failing optimizer test
jpritikin [Tue, 8 Apr 2014 19:59:48 +0000 (19:59 +0000)]
Add failing optimizer test

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3306 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoUse --debugger-args, maybe helps on MacOS
jpritikin [Tue, 8 Apr 2014 14:42:13 +0000 (14:42 +0000)]
Use --debugger-args, maybe helps on MacOS

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3305 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoSuppress gdb's new thread/thread exited messages
jpritikin [Tue, 8 Apr 2014 10:05:07 +0000 (10:05 +0000)]
Suppress gdb's new thread/thread exited messages

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3304 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRepair test: don't ask for unavailable derivs
jpritikin [Tue, 8 Apr 2014 09:55:08 +0000 (09:55 +0000)]
Repair test: don't ask for unavailable derivs

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3303 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRelax tolerance for CSOLNP
jpritikin [Tue, 8 Apr 2014 09:55:06 +0000 (09:55 +0000)]
Relax tolerance for CSOLNP

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3302 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoPreserve dimnames in assignments to MxMatrix slots
jpritikin [Mon, 7 Apr 2014 19:07:44 +0000 (19:07 +0000)]
Preserve dimnames in assignments to MxMatrix slots

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3301 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoProhibit @ in test scripts
jpritikin [Mon, 7 Apr 2014 19:07:43 +0000 (19:07 +0000)]
Prohibit @ in test scripts

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3300 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAdd test for a continuous time model (contributed by Charles Driver)
jpritikin [Mon, 7 Apr 2014 19:07:42 +0000 (19:07 +0000)]
Add test for a continuous time model (contributed by Charles Driver)

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3299 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAdded failing test for checkpointing output.
rkirkpatrick [Mon, 7 Apr 2014 15:28:17 +0000 (15:28 +0000)]
Added failing test for checkpointing output.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3298 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRefuse to compute derivs for no free parameters
jpritikin [Mon, 7 Apr 2014 14:49:31 +0000 (14:49 +0000)]
Refuse to compute derivs for no free parameters

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3297 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoFix bug introduced in "rework reporting of iterations and optimizer status"
jpritikin [Mon, 7 Apr 2014 14:49:30 +0000 (14:49 +0000)]
Fix bug introduced in "rework reporting of iterations and optimizer status"

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3296 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoFix hanging test
jpritikin [Mon, 7 Apr 2014 10:06:31 +0000 (10:06 +0000)]
Fix hanging test

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3295 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoNewton-Raphson rewrite
jpritikin [Sun, 6 Apr 2014 16:53:29 +0000 (16:53 +0000)]
Newton-Raphson rewrite

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3294 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRework reporting of iterations and optimizer status; add failing test
jpritikin [Sun, 6 Apr 2014 16:53:23 +0000 (16:53 +0000)]
Rework reporting of iterations and optimizer status; add failing test

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3293 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoFix memory corruption in matrix populate lists
jpritikin [Sat, 5 Apr 2014 23:28:48 +0000 (23:28 +0000)]
Fix memory corruption in matrix populate lists

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3292 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoUpdate nightly IFA tests for mxDataDynamic
jpritikin [Sat, 5 Apr 2014 10:38:27 +0000 (10:38 +0000)]
Update nightly IFA tests for mxDataDynamic

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3291 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoWill fail until gradient is returned by CSOLNP
jpritikin [Sat, 5 Apr 2014 10:03:09 +0000 (10:03 +0000)]
Will fail until gradient is returned by CSOLNP

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3290 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRelax tolerance for CSOLNP
jpritikin [Sat, 5 Apr 2014 09:52:42 +0000 (09:52 +0000)]
Relax tolerance for CSOLNP

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3289 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoOrdinal and GMM docs done
restabrook [Fri, 4 Apr 2014 19:23:12 +0000 (19:23 +0000)]
Ordinal and GMM docs done

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3288 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRemove unused omxInitMatrix argument
jpritikin [Fri, 4 Apr 2014 16:27:20 +0000 (16:27 +0000)]
Remove unused omxInitMatrix argument

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3287 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agomxDataDynamic
jpritikin [Fri, 4 Apr 2014 15:39:33 +0000 (15:39 +0000)]
mxDataDynamic

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3286 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoChange ASEM parameters based on more recent simulations
jpritikin [Fri, 4 Apr 2014 15:39:28 +0000 (15:39 +0000)]
Change ASEM parameters based on more recent simulations

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3285 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAccept 1 item spec if they are all the same
jpritikin [Fri, 4 Apr 2014 15:39:25 +0000 (15:39 +0000)]
Accept 1 item spec if they are all the same

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3284 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoTidy imxExtractSlot
jpritikin [Fri, 4 Apr 2014 15:39:22 +0000 (15:39 +0000)]
Tidy imxExtractSlot

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3283 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAdd more gdb hints
jpritikin [Fri, 4 Apr 2014 13:29:15 +0000 (13:29 +0000)]
Add more gdb hints

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3282 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoTest with gdb only if gdb is installed
jpritikin [Fri, 4 Apr 2014 13:29:14 +0000 (13:29 +0000)]
Test with gdb only if gdb is installed

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3281 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoDon't hide errors
jpritikin [Fri, 4 Apr 2014 13:29:12 +0000 (13:29 +0000)]
Don't hide errors

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3280 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRepair nightly trauma from the @->$ replacement
jpritikin [Fri, 4 Apr 2014 12:28:09 +0000 (12:28 +0000)]
Repair nightly trauma from the @->$ replacement

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3279 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoDemote some errors to debug output
jpritikin [Fri, 4 Apr 2014 10:30:26 +0000 (10:30 +0000)]
Demote some errors to debug output

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3278 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoSpeaking of aesthetics
jpritikin [Fri, 4 Apr 2014 10:30:21 +0000 (10:30 +0000)]
Speaking of aesthetics

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3277 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRepair merge conflict
jpritikin [Fri, 4 Apr 2014 10:30:19 +0000 (10:30 +0000)]
Repair merge conflict

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3276 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoFix breakage in IFA tests from @->$ replacement
jpritikin [Thu, 3 Apr 2014 21:49:49 +0000 (21:49 +0000)]
Fix breakage in IFA tests from @->$ replacement

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3275 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRevert "Move to failing until CSOLNP valgrind errors are addressed"
jpritikin [Thu, 3 Apr 2014 19:53:48 +0000 (19:53 +0000)]
Revert "Move to failing until CSOLNP valgrind errors are addressed"

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3274 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoImprove aesthetics of "Adjust state space expectation for removal of omxRaiseErrorf"
jpritikin [Thu, 3 Apr 2014 19:53:47 +0000 (19:53 +0000)]
Improve aesthetics of "Adjust state space expectation for removal of omxRaiseErrorf"

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3273 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAdd state space test of inputs.
mhunter [Thu, 3 Apr 2014 19:30:33 +0000 (19:30 +0000)]
Add state space test of inputs.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3272 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAdjust state space expectation for removal of omxRaiseErrorf.
mhunter [Thu, 3 Apr 2014 19:29:50 +0000 (19:29 +0000)]
Adjust state space expectation for removal of omxRaiseErrorf.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3271 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRestore now passing test
jpritikin [Thu, 3 Apr 2014 19:29:17 +0000 (19:29 +0000)]
Restore now passing test

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3270 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoFix misuse of stdargs macros
jpritikin [Thu, 3 Apr 2014 19:29:09 +0000 (19:29 +0000)]
Fix misuse of stdargs macros

For background, https://sourceware.org/bugzilla/show_bug.cgi?id=4977

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3269 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoEnable gdb for the regular 'make test' variants
jpritikin [Thu, 3 Apr 2014 19:04:03 +0000 (19:04 +0000)]
Enable gdb for the regular 'make test' variants

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3268 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoReplaced @ with $ in demos and tests.
tbrick [Thu, 3 Apr 2014 18:58:35 +0000 (18:58 +0000)]
Replaced @ with $ in demos and tests.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3267 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoChanges to avoid some slot conflicts using $ indexing.
tbrick [Thu, 3 Apr 2014 18:56:14 +0000 (18:56 +0000)]
Changes to avoid some slot conflicts using $ indexing.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3266 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoCSOLNP: memory leaks solved
mzahery [Thu, 3 Apr 2014 16:02:06 +0000 (16:02 +0000)]
CSOLNP: memory leaks solved

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3265 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoHook up recordIterationError for FIML
jpritikin [Thu, 3 Apr 2014 14:55:03 +0000 (14:55 +0000)]
Hook up recordIterationError for FIML

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3264 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRemove lock from FitContext::resetIterationError
jpritikin [Thu, 3 Apr 2014 14:55:03 +0000 (14:55 +0000)]
Remove lock from FitContext::resetIterationError

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3263 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRevert "Restore now passing test"
jpritikin [Thu, 3 Apr 2014 14:24:13 +0000 (14:24 +0000)]
Revert "Restore now passing test"

This reverts commit 44c86416d73cfd3ae92c1f47a587ddda0afae0f9.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3262 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAdd FitContext::recordIterationError
jpritikin [Thu, 3 Apr 2014 14:13:11 +0000 (14:13 +0000)]
Add FitContext::recordIterationError

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3261 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRestore now passing test
jpritikin [Thu, 3 Apr 2014 08:50:16 +0000 (08:50 +0000)]
Restore now passing test

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3260 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoCSOLNP: memory leaks in omxCSOLNPConfidenceIntervals function solved
mzahery [Thu, 3 Apr 2014 03:56:45 +0000 (03:56 +0000)]
CSOLNP: memory leaks in omxCSOLNPConfidenceIntervals function solved

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3259 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoCSOLNP: prints changed to mxLog
mzahery [Thu, 3 Apr 2014 03:53:38 +0000 (03:53 +0000)]
CSOLNP: prints changed to mxLog

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3258 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoDemote some errors to debug output
jpritikin [Thu, 3 Apr 2014 01:00:24 +0000 (01:00 +0000)]
Demote some errors to debug output

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3257 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRevert "Development"
jpritikin [Wed, 2 Apr 2014 10:35:41 +0000 (10:35 +0000)]
Revert "Development"

This reverts commit da6d9eadfb220fad7e533140d0e0ad21638fc9dc.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3256 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoCope with too many errors
jpritikin [Wed, 2 Apr 2014 10:35:22 +0000 (10:35 +0000)]
Cope with too many errors

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3255 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoDevelopment
jpritikin [Wed, 2 Apr 2014 10:35:20 +0000 (10:35 +0000)]
Development

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3254 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRelax tolerance for CSOLNP
jpritikin [Wed, 2 Apr 2014 10:17:34 +0000 (10:17 +0000)]
Relax tolerance for CSOLNP

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3253 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoCsolnp: some prints removed
mzahery [Wed, 2 Apr 2014 04:51:16 +0000 (04:51 +0000)]
Csolnp: some prints removed

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3252 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoEnumerate errors if there is more than one
jpritikin [Wed, 2 Apr 2014 00:25:34 +0000 (00:25 +0000)]
Enumerate errors if there is more than one

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3251 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRelax tolerance for CSOLNP
jpritikin [Wed, 2 Apr 2014 00:01:30 +0000 (00:01 +0000)]
Relax tolerance for CSOLNP

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3250 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRestore SVN# in version (part 2)
jpritikin [Tue, 1 Apr 2014 19:34:24 +0000 (19:34 +0000)]
Restore SVN# in version (part 2)

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3249 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRestore SVN# in version
jpritikin [Tue, 1 Apr 2014 16:58:17 +0000 (16:58 +0000)]
Restore SVN# in version

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3248 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoMake CSOLNP the default optimizer
jpritikin [Tue, 1 Apr 2014 10:25:30 +0000 (10:25 +0000)]
Make CSOLNP the default optimizer

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3247 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoCSOLNP doc added: not complete
mzahery [Tue, 1 Apr 2014 03:06:48 +0000 (03:06 +0000)]
CSOLNP doc added: not complete

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3246 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRelax tolerance for CSOLNP
jpritikin [Tue, 1 Apr 2014 00:10:54 +0000 (00:10 +0000)]
Relax tolerance for CSOLNP

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3245 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAdd Hessian information matrix for Normal expectations
jpritikin [Mon, 31 Mar 2014 17:18:29 +0000 (17:18 +0000)]
Add Hessian information matrix for Normal expectations

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3244 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoReport all the errors instead of only the most recent one
jpritikin [Mon, 31 Mar 2014 17:18:28 +0000 (17:18 +0000)]
Report all the errors instead of only the most recent one

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3243 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoCan fail due to CSOLNP valgrind issues
jpritikin [Mon, 31 Mar 2014 17:18:27 +0000 (17:18 +0000)]
Can fail due to CSOLNP valgrind issues

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3242 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRelax tolerance for CSOLNP
jpritikin [Sun, 30 Mar 2014 11:33:51 +0000 (11:33 +0000)]
Relax tolerance for CSOLNP

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3241 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoReport correct Hessian
jpritikin [Sun, 30 Mar 2014 11:25:43 +0000 (11:25 +0000)]
Report correct Hessian

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3240 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoCSOLNP: Hessian returned
mzahery [Sat, 29 Mar 2014 23:17:55 +0000 (23:17 +0000)]
CSOLNP: Hessian returned

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3239 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoCSOLNP: matrix inverse function changed
mzahery [Sat, 29 Mar 2014 22:58:28 +0000 (22:58 +0000)]
CSOLNP: matrix inverse function changed

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3238 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoUse mxOption mvn settings for omxMnor & omxAllInt Algebra ops
jpritikin [Sat, 29 Mar 2014 21:22:52 +0000 (21:22 +0000)]
Use mxOption mvn settings for omxMnor & omxAllInt Algebra ops

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3237 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRun the options list through omxCallAlgebra
jpritikin [Sat, 29 Mar 2014 21:22:48 +0000 (21:22 +0000)]
Run the options list through omxCallAlgebra

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3236 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoRevert "Use mxOption mvn settings for omxMnor & omxAllInt Algebra ops"
jpritikin [Sat, 29 Mar 2014 18:38:12 +0000 (18:38 +0000)]
Revert "Use mxOption mvn settings for omxMnor & omxAllInt Algebra ops"

This reverts commit abd1785b3779b82ee377047c07c62ba3b238f610.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3235 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoUse mxOption mvn settings for omxMnor & omxAllInt Algebra ops
jpritikin [Sat, 29 Mar 2014 17:25:09 +0000 (17:25 +0000)]
Use mxOption mvn settings for omxMnor & omxAllInt Algebra ops

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3234 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoBetter if LISREL works
jpritikin [Sat, 29 Mar 2014 16:08:07 +0000 (16:08 +0000)]
Better if LISREL works

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3233 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAnother bugfix for @-to-$ transition.
tbrick [Sat, 29 Mar 2014 14:49:52 +0000 (14:49 +0000)]
Another bugfix for @-to-$ transition.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3232 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoBugfix for @-to-$ transition.
tbrick [Sat, 29 Mar 2014 14:49:27 +0000 (14:49 +0000)]
Bugfix for @-to-$ transition.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3231 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoAdded $ accessors to several classes. Still need to change examples and demos, but...
tbrick [Sat, 29 Mar 2014 14:10:52 +0000 (14:10 +0000)]
Added $ accessors to several classes.  Still need to change examples and demos, but from here on nobody should use @-access, only himBHaccess.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3230 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoMoved seg-faulting LISREL tests to models/failing.
tbrick [Sat, 29 Mar 2014 13:38:48 +0000 (13:38 +0000)]
Moved seg-faulting LISREL tests to models/failing.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3229 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoReduce tolerance for CSOLNP
jpritikin [Sat, 29 Mar 2014 12:06:49 +0000 (12:06 +0000)]
Reduce tolerance for CSOLNP

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3228 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoMove to failing until CSOLNP valgrind errors are addressed
jpritikin [Sat, 29 Mar 2014 12:06:48 +0000 (12:06 +0000)]
Move to failing until CSOLNP valgrind errors are addressed

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3227 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoSwitch line endings back to unix style
jpritikin [Fri, 28 Mar 2014 21:24:41 +0000 (21:24 +0000)]
Switch line endings back to unix style

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3226 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoMixture Doc Pages
restabrook [Fri, 28 Mar 2014 18:14:15 +0000 (18:14 +0000)]
Mixture Doc Pages

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3225 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoPlug possible memory leak in LISREL expectation
mhunter [Fri, 28 Mar 2014 17:22:43 +0000 (17:22 +0000)]
Plug possible memory leak in LISREL expectation

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3224 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoDocumentation-related tweaks to roxygen-related parts of .R files.
rkirkpatrick [Thu, 27 Mar 2014 22:13:40 +0000 (22:13 +0000)]
Documentation-related tweaks to roxygen-related parts of .R files.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3223 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoFurther tweaks to .Rd files.
rkirkpatrick [Thu, 27 Mar 2014 22:10:58 +0000 (22:10 +0000)]
Further tweaks to .Rd files.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3222 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoFree more matrices from the state space expectation.
mhunter [Thu, 27 Mar 2014 19:55:43 +0000 (19:55 +0000)]
Free more matrices from the state space expectation.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3221 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoUndoing my change to line 80 of mxCI.Rd .
rkirkpatrick [Thu, 27 Mar 2014 19:36:34 +0000 (19:36 +0000)]
Undoing my change to line 80 of mxCI.Rd .

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3220 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoJoshua found the new bug that was killing WLS. The WLS fit function freed the weight...
mhunter [Thu, 27 Mar 2014 19:08:17 +0000 (19:08 +0000)]
Joshua found the new bug that was killing WLS.  The WLS fit function freed the weight matrix (i.e. the data acov matrix) so it caused a problem when omxState tried to free the data that was already gone.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3219 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoTweaks to .Rd files based on cran-check results.
rkirkpatrick [Thu, 27 Mar 2014 18:51:44 +0000 (18:51 +0000)]
Tweaks to .Rd files based on cran-check results.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3218 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoCleaning failing models: remove working model
mhunter [Thu, 27 Mar 2014 17:23:12 +0000 (17:23 +0000)]
Cleaning failing models: remove working model

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3217 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoCleaning failing models
mhunter [Thu, 27 Mar 2014 17:22:15 +0000 (17:22 +0000)]
Cleaning failing models

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3216 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

3 years agoFailing WLS saturated test.
mhunter [Thu, 27 Mar 2014 15:54:13 +0000 (15:54 +0000)]
Failing WLS saturated test.

git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3215 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1