environment-for-tree-exploration:ete.git
2010-04-20 Jaime Huerta... Fix: support values after rooting finally solved. Added...
2010-04-19 Jaime Huerta... Fix: set_outgroup + support placement hopefully solved
2010-04-19 Jaime Huerta... Fixed: support in down_branch_connector node was not...
2010-04-08 Jaime Huerta... preparing building scripts to submit to PyPI
2010-04-08 Jaime Huerta... added new information files. renamed unitest dir
2010-04-07 Jaime Huerta... Fix:get_longest_isoform in phylomeDB API. Improvment...
2010-03-30 Jaime Huerta... Fix: problem with support values when rooting trees...
2010-02-17 Jaime Huerta... fix: prune examples do not include crop method
2010-02-16 Jaime Huerta... fix: prune function
2010-01-25 Jaime Huerta... Fix: bug in pruning algorith. Now it is fixed and it...
2010-01-20 Jaime Huerta... Silly: Cosmetic changes and added missing example file
2010-01-14 Jaime Huerta... fix: improved scipy import.
2010-01-14 Jaime Huerta... fix: improved scipy import.
2010-01-14 Jaime Huerta... fix: readded scipy dependency. Neeeded for Sil index...
2010-01-14 Jaime Huerta... Addon: removed scipy dependency
2010-01-14 Jaime Huerta... fix: errors where trying to raise
2010-01-14 Jaime Huerta... fix: cannot import sys in spoverlappy, help in Tree...
2009-12-15 Jaime Huerta... reindent all the files to have 4-space indentation...
2009-11-27 Jaime Huerta... Fixed: error in build_ete. Disabled Rpy unitest
2009-11-27 Jaime Huerta... change zoom error message
2009-11-27 Jaime Huerta... comments
2009-11-27 Jaime Huerta... Added: PDF auto size
2009-09-22 Jaime Huerta... improvement: build script
2009-09-14 Jaime Huerta... Bug fixed: Delete node broken in GUI
2009-09-14 Jaime Huerta... added images and arrays to the tutorial example directories
2009-09-09 Jaime Huerta... show_tree bug
2009-09-09 Jaime Huerta... fixed problem with layouts import
2009-09-09 Jaime Huerta... fixed problem in PhyloTree import within phylomeDB...
2009-09-09 Jaime Huerta... fixed problem in asETE()
2009-09-09 Jaime Huerta... import * is no longer used (only in the main __init__...
2009-09-08 Jaime Huerta... optional modules import problem is solved.
2009-09-08 Jaime Huerta... setup.py check setuptools before download it. Fixed...
2009-09-08 Jaime Huerta... Fixed setuptools problem in setup.py file
2009-09-07 Jaime Huerta... tutorial + spellcheck
2009-09-04 Jaime Huerta... Building script generates documentations, check tuto...
2009-09-04 Jaime Huerta... building ete script includes unittests
2009-09-04 Jaime Huerta... Added documentation files and building scripts
2009-09-03 Jaime Huerta... Fixed problem in get_distance with only_topoly=True...
2009-09-02 Jaime Huerta... Fixed problem of overlaping faces when node height...
2009-08-26 Jaime Huerta... Improved GUI. Now it includes icons and two nice panels...
2009-08-21 Jaime Huerta... Newick parser improved. Now it supports different types...
2009-07-24 Jaime Huerta... removed clusterdist
2009-07-24 Jaime Huerta... changed clusvalidation for clustervalidtation module...
2009-07-24 Jaime Huerta... added dunn_index calculation in clustvalidation. Fixed...
2009-07-22 Jaime Huerta... Fixed problems with zoom in/out and negative branchs...
2009-07-21 Jaime Huerta... removed some crappy header lines
2009-07-21 Jaime Huerta... deleted examples from main branch. They can be develope...
2009-07-21 Jaime Huerta... Fixed bug in write newick function -> node.names are...
2009-07-18 Jaime Huerta... Solved problem in phylomeDB.searchID: When a matching...
2009-07-16 Jaime Huerta... Solved bug in clustering.profile faces.
2009-07-16 Jaime Huerta... deviation and profile properties are fixed in Cluster...
2009-07-16 Jaime Huerta... Still problems in phylomeDB.get_id_translations
2009-07-13 Jaime Huerta... small bug in duplicated entry names in fasta parser
2009-07-06 Jaime Huerta... removed view-backends workaround from master branch
2009-07-06 Jaime Huerta... deleted scripts (they do not apply for the ete release)
2009-07-06 Jaime Huerta... change pygenomics for ete2 module name. Pygenomics...
2009-07-06 Jaime Huerta... fixed typo in build_ete. treeview exposes main faces...
2009-07-01 Jaime Huerta... Fixed problem in setup.
2009-07-01 Jaime Huerta... render_tree accepts header. Fixed problems in setup.
2009-06-18 jaimeAdd clustering tree properties. Fix add to array table...
2009-06-02 jaimeAntialiasing zoom in treeview GUI. Fixed species_functi...
2009-05-25 jaimefixed error on newick string check in nw read parser.
2009-05-25 Jaime Huerta... improved zoom GUI. Visualization of clusters and algs...
2009-05-22 Jaime Huerta... Small change on id_conversion table in PhylomeDB. API...
2009-05-22 Jaime Huerta... Fixed problem with tree_properties variable when callin...
2009-05-22 Jaime Huerta... fixed get_childs error
2009-05-22 Jaime Huerta... show and render accepts now TreeImageProperties.EvolEve...
2009-05-20 Jaime Huerta... Added warning to read_newick function. Improved method...
2009-05-19 Jaime Huerta... fixed problem with write_arraytable function. Removed...
2009-05-19 Jaime Huerta... fixed invalid syntax in clusvalidation.py
2009-05-19 Jaime Huerta... fixed invalid syntax in clusvalidation.py
2009-05-19 Jaime Huerta... Fixed bug in get_proteomes_in_phylome function from...
2009-05-18 Jaime Huerta... added tree_reconciliation example
2009-05-18 Jaime Huerta... better build_ete script. Added NCBI TOL example
2009-05-18 Jaime Huerta... added files for building ete pkg
2009-05-18 Jaime Huerta... removed flag for ete. Now I use a different branch
2009-05-18 Jaime Huerta... removed app from ete branch. Not needed
2009-05-18 Jaime Huerta... merging with main branch
2009-05-13 Jaime Huerta... added flag to build ete_pkg
2009-05-13 Jaime Huerta... Fixing clustering module
2009-05-08 jaimeremove trash files. See git manual for ignore some...
2009-05-08 jaimefixed import problem. Now modules import from pygenomics
2009-05-08 leoprueba comit
2009-05-08 Jaime Huerta... Merge http://pygenomics.cgenomics.org/pygenomics
2009-05-08 Jaime Huerta... added unitest and apps
2009-05-08 Jaime Huerta... removed test
2009-05-08 Jaime Huerta... test commit
2009-05-08 Jaime Huerta... test commit
2009-05-08 Jaime Huerta... Added script/ and app/ dirs. Added dSdN calculation...
2009-05-07 Jaime Huerta... Start